Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_50: 8418 - KOG1611 Predicted short chain-type dehydrogenase, at 118975 to 119840 8418 mRNA_51: 8419 - K10392 KIF1 kinesin family member 1, at 120072 to 126065 8419 mRNA_52: 8420 - Hypothetical Protein, at 126119 to 126700 8420 mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126911 to 127593 8421 mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128047 to 129356 8422
Group Condition mRNA_50 mRNA_51 mRNA_52 mRNA_53 mRNA_54
8418
8419
8420
8421
8422
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.9 -0.7   -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 -0.3   -0.3
auxotrophy YNB Glucose -0.2 -0.4 -0.3   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 -0.4   -0.1
auxotrophy Dropout Complete -0.2 -0.4 -0.5   -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.7 -0.4   0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.3   -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.6 -0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.4 -0.8   -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.5   0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.0 -0.3   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 0.3   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.3   0.4
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 -0.3   0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.2 0.1   0.3
growth on oleic acid YNB Glucose -0.1 -0.4 -0.1   0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 0.0   -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.3 0.0   0.0
growth on ypd YPD 0.2 0.0 -0.2   0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -0.0   0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2 0.3   -0.1
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