Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108511 to 110701 8413 mRNA_46: 8414 - HMMPfam-Protein of unknown function (DUF3292)-PF11696, at 111074 to 114249 8414 mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114589 to 115599 8415 mRNA_48: 8416 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 116348 to 117395 8416 mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417
Group Condition mRNA_45 mRNA_46 mRNA_47 mRNA_48 mRNA_49
8413
8414
8415
8416
8417
auxotrophy Dropout Complete 0.2 -0.1 -0.2 -0.9 -0.1
auxotrophy YNB Glucose 0.1 0.0 0.1 -1.0 -0.2
growth on oleic acid YNB Glucose -0.1 -0.1 -0.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.3 -1.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.1 0.0 -0.4 -0.6
growth on oleic acid YNB Oleic Acid -0.1 0.1 -0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.0 -0.1 -0.1 -0.3
growth on ypd YPD 0.4 -0.0 -0.0 -0.8 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.2 0.1 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 0.3 -0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.1 -0.1 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.2 0.2 -0.7
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 0.2 0.4 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 0.2 0.4 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.1 0.2 0.5
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.1 0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 0.4 -0.4 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.1 0.1 -0.2 0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.1 -0.0 0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.0 -0.1 0.7 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.2 0.5 0.7 0.0
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