Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97555 to 101757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101957 to 104570 8410 mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104762 to 105972 8411 mRNA_44: 8412 - Hypothetical Protein, at 106197 to 108340 8412 mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108511 to 110701 8413
Group Condition mRNA_41 mRNA_42 mRNA_43 mRNA_44 mRNA_45
8409
8410
8411
8412
8413
ypd buoyancy 40 hrs Low Buoyancy     -0.3 -0.4 0.1
auxotrophy YNB Glucose 75mM Methionine     -0.3 -0.3 0.0
auxotrophy YNB Glucose 75mM Arginine     -0.4 -0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.3 -0.2 -0.1
growth on oleic acid YNB Glucose     0.1 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy     -0.2 -0.4 0.1
growth on oleic acid YNB Oleic Acid     -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid     -0.3 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate     -0.2 -0.3 0.2
growth on ricinoleic acid YNB Glucose     -0.1 0.0 -0.1
auxotrophy YNB Glucose     -0.5 0.3 0.1
ypd buoyancy 40 hrs High Buoyancy     -0.1 -0.2 0.1
auxotrophy Dropout Complete     -0.6 0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation     0.3 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.0 -0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate     -0.2 0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.1 -0.4 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.4 -0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.1 0.2 0.4
growth on ypd YPD     0.0 0.3 0.4
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