Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90908 to 93083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93493 to 94436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94865 to 95759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96128 to 97227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97555 to 101757 8409
Group Condition mRNA_37 mRNA_38 mRNA_39 mRNA_40 mRNA_41
8405
8406
8407
8408
8409
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -0.1 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 -0.1 0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 0.0 -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.0 0.0  
auxotrophy Dropout Complete 0.2 0.0 -0.1 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.0 -0.2 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 -0.0 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 0.2 0.2  
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.0 0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.0 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 -0.1 -0.0  
growth on ricinoleic acid YNB Glucose 0.2 -0.3 0.2 0.1  
growth on ypd YPD 0.4 -0.2 -0.1 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.4 0.1 0.1  
auxotrophy YNB Glucose 0.3 0.0 0.1 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 0.1 0.1  
auxotrophy YNB Glucose 75mM Methionine 0.4 0.2 -0.0 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 0.1 0.0  
growth on oleic acid YNB Oleic Acid 0.4 0.1 0.4 0.1  
growth on oleic acid YNB Glucose 0.6 0.3 0.3 0.0  
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.3 0.2 0.2  
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