Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84983 to 86013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86184 to 90147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90908 to 93083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93493 to 94436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94865 to 95759 8407
Group Condition mRNA_35 mRNA_36 mRNA_37 mRNA_38 mRNA_39
8403
8404
8405
8406
8407
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.0 -0.3 -0.7 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.4 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.1 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.2 0.1 0.2 -0.3 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.3 -0.1 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.2 -0.2 0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2 0.1 0.2 -0.1
auxotrophy Dropout Complete -0.0 0.3 0.2 0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 0.5 -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.0 0.2 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.1 0.4 0.2 -0.0
growth on ypd YPD 0.2 0.5 0.4 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.3 0.3 0.1 0.1
auxotrophy YNB Glucose 0.2 0.3 0.3 0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2 0.6 0.3 0.2
growth on oleic acid YNB Oleic Acid 0.2 0.1 0.4 0.1 0.4
growth on oleic acid YNB Glucose -0.0 0.2 0.6 0.3 0.3
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