Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_33: 8401 - HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371, at 79205 to 81384 8401 mRNA_34: 8402 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 81530 to 84325 8402 mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84983 to 86013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86184 to 90147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90908 to 93083 8405
Group Condition mRNA_33 mRNA_34 mRNA_35 mRNA_36 mRNA_37
8401
8402
8403
8404
8405
ypd buoyancy 40 hrs Median Buoyancy -0.2 -2.2 -0.1 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -3.5 -0.2 0.2 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.6 -2.2 -0.1 0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.8 -3.1 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -1.1 0.2 0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.5 0.3 0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 -0.0 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -1.1 -0.1 0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 2.1 -3.0 0.1 0.3 0.5
auxotrophy Dropout Complete 0.8 -1.3 -0.0 0.3 0.2
growth on ricinoleic acid YNB Glucose 1.0 -1.0 -0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.6 -0.8 0.0 0.1 0.4
auxotrophy YNB Glucose 0.6 -1.1 0.2 0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 1.2 -0.2 -0.1 -0.4
growth on oleic acid YNB Glucose 0.9 -1.2 -0.0 0.2 0.6
growth on oleic acid YNB Oleic Acid 1.3 -1.1 0.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.7 -0.1 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 1.1 -0.2 0.2 0.1
growth on ypd YPD 0.7 0.1 0.2 0.5 0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 2.3 0.1 -0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 0.9 0.0 0.3 0.3
remove
mRNA_33
plot
remove
mRNA_34
plot
remove
mRNA_35
remove
mRNA_36
plot
remove
mRNA_37
plot