Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_27: 8395 - K00088 IMPDH, guaB IMP dehydrogenase, at 70303 to 72461 8395 mRNA_28: 8396 - Hypothetical Protein, at 72914 to 73928 8396 mRNA_29: 8397 - HMMPfam-Swi5-PF07061, at 74095 to 74821 8397 mRNA_30: 8398 - KOG2798 Putative trehalase, at 75069 to 76780 8398 mRNA_31: 8399 - K01520 dut, DUT dUTP pyrophosphatase, at 76865 to 77832 8399
Group Condition mRNA_27 mRNA_28 mRNA_29 mRNA_30 mRNA_31
8395
8396
8397
8398
8399
auxotrophy Dropout Complete   -0.1 -0.5 -0.5  
auxotrophy YNB Glucose 75mM Arginine   -0.3 -0.2 -0.5  
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.1 -0.6  
auxotrophy YNB Glucose   0.0 -0.1 -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.0 -0.6  
growth on oleic acid YNB Glucose   -0.1 -0.1 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 0.1 -0.7  
ypd buoyancy 40 hrs Median Buoyancy   -0.2 -0.3 -0.2  
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.2 -0.4  
growth on ricinoleic acid YNB Glucose   -0.1 -0.0 -0.5  
ypd buoyancy 40 hrs High Buoyancy   -0.1 -0.2 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.1 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.2 0.2 -0.5  
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 0.1 -0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 0.0 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 0.4 -0.2  
growth on ypd YPD   0.1 0.1 0.1  
growth on oleic acid YNB Oleic Acid   0.4 -0.1 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate   0.0 0.1 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.2 0.2  
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.4 0.2  
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