Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_26: 8394 - K04499 RUVBL1, RVB1, INO80H RuvB-like protein 1 (pontin 52), at 68110 to 69853 8394 mRNA_27: 8395 - K00088 IMPDH, guaB IMP dehydrogenase, at 70303 to 72461 8395 mRNA_28: 8396 - Hypothetical Protein, at 72914 to 73928 8396 mRNA_29: 8397 - HMMPfam-Swi5-PF07061, at 74095 to 74821 8397 mRNA_30: 8398 - KOG2798 Putative trehalase, at 75069 to 76780 8398
Group Condition mRNA_26 mRNA_27 mRNA_28 mRNA_29 mRNA_30
8394
8395
8396
8397
8398
auxotrophy Dropout Complete     -0.1 -0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine     -0.3 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine     -0.1 -0.1 -0.6
auxotrophy YNB Glucose     0.0 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.1 0.0 -0.6
growth on oleic acid YNB Glucose     -0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.1 0.1 -0.7
ypd buoyancy 40 hrs Median Buoyancy     -0.2 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy     -0.1 -0.2 -0.4
growth on ricinoleic acid YNB Glucose     -0.1 -0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy     -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.1 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.2 0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid     0.3 0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.1 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation     -0.2 0.4 -0.2
growth on ypd YPD     0.1 0.1 0.1
growth on oleic acid YNB Oleic Acid     0.4 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate     0.0 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate     0.1 0.4 0.2
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