Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55031 to 59299 8388 mRNA_21: 8389 - SUPERFAMILY--SSF51045, at 59520 to 60624 8389 mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61179 to 62127 8390 mRNA_23: 8391 - K02938 RP-L8e, RPL8 large subunit ribosomal protein L8e, at 62374 to 63560 8391 mRNA_24: 8392 - Hypothetical Protein, at 64525 to 65394 8392
Group Condition mRNA_20 mRNA_21 mRNA_22 mRNA_23 mRNA_24
8388
8389
8390
8391
8392
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.3 0.3   -0.6
auxotrophy Dropout Complete 0.1 -0.3 -0.4   0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.1 -0.1   -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.7 0.5   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.3   -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3 -0.3   0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 -0.2   0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.0   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.0 0.4   -0.2
growth on ricinoleic acid YNB Glucose -0.4 0.4 -0.1   0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 -0.3   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.5 0.2   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 0.4   0.1
auxotrophy YNB Glucose 0.2 0.5 0.1   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.3 -0.1   0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.6 0.1   0.0
growth on oleic acid YNB Glucose -0.2 -0.1 0.3   0.8
growth on ypd YPD -0.2 1.5 -0.2   -0.2
growth on oleic acid YNB Oleic Acid 0.0 0.4 0.0   0.6
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