Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_16: 8384 - K03407 cheA two-component system, chemotaxis family, sensor kinase CheA, at 41535 to 45882 8384 mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48620 to 50142 8385 mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50473 to 51921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52301 to 54654 8387 mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55031 to 59299 8388
Group Condition mRNA_16 mRNA_17 mRNA_18 mRNA_19 mRNA_20
8384
8385
8386
8387
8388
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.0 -0.2 -0.6
growth on ypd YPD -0.1   -0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose -0.1   -0.1 0.0 -0.4
auxotrophy Dropout Complete 0.2   -0.2 -0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1   -0.1 -0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4   -0.4 0.1 -0.3
growth on oleic acid YNB Glucose -0.0   0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.0 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.3 0.2 0.0
growth on oleic acid YNB Oleic Acid -0.0   0.1 -0.1 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   -0.3 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.1 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2   0.1 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0   -0.0 0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   0.1 0.1 -0.1
auxotrophy YNB Glucose 0.3   0.1 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.1 0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.0 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   0.0 0.3 -0.1
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