Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_13: 8381 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 33714 to 35045 8381 mRNA_14: 8382 - K07199 PRKAB 5'-AMP-activated protein kinase, regulatory beta subunit, at 36682 to 38243 8382 mRNA_15: 8383 - K02321 POLA2 DNA polymerase alpha subunit B, at 39313 to 41292 8383 mRNA_16: 8384 - K03407 cheA two-component system, chemotaxis family, sensor kinase CheA, at 41535 to 45882 8384 mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48620 to 50142 8385
Group Condition mRNA_13 mRNA_14 mRNA_15 mRNA_16 mRNA_17
8381
8382
8383
8384
8385
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 -2.3   0.1  
growth on oleic acid YNB Oleic Acid -0.6 -2.1   -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.9   -0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.3   0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -1.2   -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.0   0.1  
growth on oleic acid YNB Glucose 0.1 -1.0   -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.9   0.2  
growth on ricinoleic acid YNB Glucose -0.5 -0.0   -0.1  
growth on ypd YPD -0.0 -0.5   -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.6   0.0  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.7   0.1  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.5   0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1   0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.4   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.8   0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.7   0.1  
auxotrophy YNB Glucose 75mM Arginine -0.4 0.5   0.1  
auxotrophy Dropout Complete 0.0 0.0   0.2  
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3   0.2  
auxotrophy YNB Glucose -0.3 0.5   0.3  
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