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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8: 8376 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 23178 to 26734
8376
mRNA_9: 8377 - Hypothetical Protein, at 28711 to 29599
8377
mRNA_10: 8378 - Hypothetical Protein, at 29867 to 30741
8378
mRNA_11: 8379 - Hypothetical Protein, at 31186 to 32050
8379
mRNA_12: 8380 - K12757 MYL12 myosin regulatory light chain 12, at 32509 to 33351
8380
Group
Condition
mRNA_8
mRNA_9
mRNA_10
mRNA_11
mRNA_12
8376
8377
8378
8379
8380
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.2
-0.7
-1.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.0
-0.4
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-1.4
0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
-0.5
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
-0.6
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.2
0.1
-0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
0.2
-0.1
0.3
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
0.2
-0.4
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.0
0.0
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
0.3
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
-0.3
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
-0.1
-0.1
0.4
growth on oleic acid
YNB Oleic Acid
0.2
0.3
-0.4
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.1
-0.1
0.0
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
0.2
-0.1
0.2
growth on ypd
YPD
0.1
-0.0
0.4
0.1
-0.1
growth on oleic acid
YNB Glucose
0.2
0.2
-0.1
0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.3
-0.1
0.3
auxotrophy
Dropout Complete
0.1
0.2
0.3
-0.0
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.3
0.3
0.4
0.3
auxotrophy
YNB Glucose
0.2
0.4
0.4
-0.1
0.3
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