Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3: 8371 - K15161 CCNC, SSN8 cyclin C, at 8155 to 10023 8371 mRNA_4: 8372 - K00772 mtaP, MTAP 5'-methylthioadenosine phosphorylase, at 10225 to 11839 8372 mRNA_5: 8373 - SUPERFAMILY--SSF51695, at 12047 to 13694 8373 mRNA_6: 8374 - SUPERFAMILY--SSF47676, at 13861 to 19221 8374 mRNA_7: 8375 - HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217, at 20174 to 22955 8375
Group Condition mRNA_3 mRNA_4 mRNA_5 mRNA_6 mRNA_7
8371
8372
8373
8374
8375
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.8 0.2 -0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -1.9 0.4 0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.9 -0.3 0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 0.1 0.1 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 0.1 -0.4 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.2 -0.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.8 0.1 0.1 0.0 -0.8
auxotrophy Dropout Complete 0.1 -0.6 -0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.6 0.2 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.7 -0.4 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 0.0 -0.0 0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.5 0.3 -0.1 -0.4
growth on ypd YPD -0.2 -0.7 0.4 -0.2 0.3
auxotrophy YNB Glucose 0.0 0.2 0.3 -0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1 -0.3 0.2 -0.0
growth on oleic acid YNB Glucose -0.0 0.1 0.0 -0.0 -0.2
growth on ricinoleic acid YNB Glucose 0.0 0.2 -0.0 0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 0.3 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 -0.6 0.2 0.5 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3 0.1 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.2 0.3 0.1 0.0
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