Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8482: 16850 - K00854 xylB, XYLB xylulokinase, at 1328574 to 1331754 16850 mRNA_8483: 16851 - BLAST GA28568 gene product from transcript GA28568-RA [Rhiz..., at 1332455 to 1336946 16851 mRNA_8484: 16852 - KOG0725 Reductases with broad range of substrate specificities, at 1337169 to 1338536 16852 mRNA_8485: 16853 - K12946 SPCS1 signal peptidase complex subunit 1, at 1338760 to 1339317 16853 mRNA_8486: 16854 - KOG1162 Predicted small molecule transporter, at 1339476 to 1341474 16854
Group Condition mRNA_8482 mRNA_8483 mRNA_8484 mRNA_8485 mRNA_8486
16850
16851
16852
16853
16854
auxotrophy YNB Glucose -0.1 -0.0 -0.2 -0.1  
growth on ricinoleic acid YNB Glucose 0.0 -0.0 0.1 -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 -0.3 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.3 -0.2 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.2 0.2  
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 -0.1 0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 -0.0 0.3  
growth on ypd YPD -0.0 -0.1 0.0 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.2 -0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.1 0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0 0.1 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.2 0.4 -0.5  
auxotrophy Dropout Complete 0.0 0.1 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 0.4 -0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0 0.1 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.0 0.2 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 -0.0 0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.2 0.4 -0.3  
growth on oleic acid YNB Oleic Acid 0.0 0.1 0.3 0.2  
growth on oleic acid YNB Glucose -0.0 0.1 0.3 0.3  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 0.1 0.4  
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