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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1310898 to 1312321
16841
mRNA_8474: 16842 - Hypothetical Protein, at 1313231 to 1316089
16842
mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1316570 to 1317509
16843
mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1318401 to 1318799
16844
mRNA_8477: 16845 - KOG4405 GDP dissociation inhibitor, at 1319063 to 1321156
16845
Group
Condition
mRNA_8473
mRNA_8474
mRNA_8475
mRNA_8476
mRNA_8477
16841
16842
16843
16844
16845
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
-1.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.6
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.0
0.2
growth on ypd
YPD
0.2
0.1
0.2
growth on oleic acid
YNB Glucose
0.3
0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.2
0.4
auxotrophy
YNB Glucose
-0.2
0.1
0.7
auxotrophy
Dropout Complete
-0.0
0.4
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
0.8
growth on ricinoleic acid
YNB Glucose
-0.1
0.4
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.0
0.7
growth on oleic acid
YNB Oleic Acid
0.1
0.4
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.3
0.7
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