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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8472: 16840 - KOG1769 Ubiquitin-like proteins, at 1310090 to 1310770
16840
mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1310898 to 1312321
16841
mRNA_8474: 16842 - Hypothetical Protein, at 1313231 to 1316089
16842
mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1316570 to 1317509
16843
mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1318401 to 1318799
16844
Group
Condition
mRNA_8472
mRNA_8473
mRNA_8474
mRNA_8475
mRNA_8476
16840
16841
16842
16843
16844
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.7
-0.4
-1.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.1
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.5
0.0
-0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
-0.0
-0.1
growth on ypd
YPD
-0.2
0.2
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
0.0
0.2
growth on oleic acid
YNB Glucose
-0.1
0.3
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.1
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.4
0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
0.1
0.8
auxotrophy
YNB Glucose
0.0
-0.2
0.1
0.7
auxotrophy
Dropout Complete
-0.1
-0.0
0.4
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.1
-0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
0.0
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
0.2
0.8
growth on oleic acid
YNB Oleic Acid
0.1
0.1
0.4
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.0
0.2
0.4
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
0.4
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.0
0.3
0.7
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