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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8449: 16817 - KOG0198 MEKK and related serine/threonine protein kinases, at 1258732 to 1261080
16817
mRNA_8450: 16818 - K06670 SCC1, MCD1, RAD21 cohesin complex subunit SCC1, at 1264396 to 1266785
16818
mRNA_8451: 16819 - Hypothetical Protein, at 1266925 to 1267155
16819
mRNA_8452: 16820 - Hypothetical Protein, at 1269546 to 1270646
16820
mRNA_8453: 16821 - Hypothetical Protein, at 1271447 to 1272536
16821
Group
Condition
mRNA_8449
mRNA_8450
mRNA_8451
mRNA_8452
mRNA_8453
16817
16818
16819
16820
16821
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.5
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.4
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.2
-0.9
auxotrophy
YNB Glucose
-0.4
-0.4
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.4
0.4
auxotrophy
Dropout Complete
-0.1
-0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.1
growth on ypd
YPD
-0.1
-0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.2
0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.5
1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.3
1.5
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