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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8448: 16816 - HMMPfam-Protein of unknown function (DUF962)-PF06127, at 1257751 to 1258571
16816
mRNA_8449: 16817 - KOG0198 MEKK and related serine/threonine protein kinases, at 1258732 to 1261080
16817
mRNA_8450: 16818 - K06670 SCC1, MCD1, RAD21 cohesin complex subunit SCC1, at 1264396 to 1266785
16818
mRNA_8451: 16819 - Hypothetical Protein, at 1266925 to 1267155
16819
mRNA_8452: 16820 - Hypothetical Protein, at 1269546 to 1270646
16820
Group
Condition
mRNA_8448
mRNA_8449
mRNA_8450
mRNA_8451
mRNA_8452
16816
16817
16818
16819
16820
auxotrophy
YNB Glucose
-0.0
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.4
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.1
auxotrophy
Dropout Complete
0.2
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.0
-0.2
growth on ypd
YPD
0.3
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
-0.0
growth on ricinoleic acid
YNB Glucose
0.2
0.1
0.1
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