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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8441: 16809 - K09274 K09274 HMG box factor, other, at 1236360 to 1239302
16809
mRNA_8442: 16810 - K19852 KIN1_2 serine/threonine protein kinase KIN1/2, at 1239780 to 1244729
16810
mRNA_8443: 16811 - Hypothetical Protein, at 1244960 to 1245436
16811
mRNA_8444: 16812 - HMMPfam-HPP family-PF04982, at 1245656 to 1246720
16812
mRNA_8445: 16813 - KOG0691 Molecular chaperone (DnaJ superfamily), at 1247628 to 1249851
16813
Group
Condition
mRNA_8441
mRNA_8442
mRNA_8443
mRNA_8444
mRNA_8445
16809
16810
16811
16812
16813
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.7
0.7
-0.8
-0.9
auxotrophy
YNB Glucose
-0.1
0.2
0.4
-1.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
0.0
-0.8
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.0
0.4
-1.0
-0.1
auxotrophy
Dropout Complete
0.1
0.1
0.4
-1.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
0.2
0.0
-0.5
-0.2
growth on ypd
YPD
-0.2
-0.2
0.4
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.3
0.5
-0.6
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.2
-0.3
0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.4
0.4
-0.4
-0.2
growth on oleic acid
YNB Glucose
0.1
0.0
0.5
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.5
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
0.3
0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.1
0.4
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.2
0.4
-0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.5
0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
0.1
0.4
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
0.2
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.0
0.5
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.4
0.2
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.4
0.1
0.1
0.3
-0.1
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