Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8418: 16786 - HMMPfam-Cgr1 family-PF03879, at 1174029 to 1174652 16786 mRNA_8419: 16787 - K14310 NUP205, NUP192 nuclear pore complex protein Nup205, at 1175387 to 1181685 16787 mRNA_8420: 16788 - SUPERFAMILY--SSF52047, at 1181811 to 1183583 16788 mRNA_8421: 16789 - K05285 PIGN phosphatidylinositol glycan, class N, at 1183615 to 1187180 16789 mRNA_8422: 16790 - K06675 SMC4 structural maintenance of chromosome 4, at 1187443 to 1193584 16790
Group Condition mRNA_8418 mRNA_8419 mRNA_8420 mRNA_8421 mRNA_8422
16786
16787
16788
16789
16790
ypd buoyancy 40 hrs No Buoyancy Separation   -1.9 -0.2 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.7 -0.0 0.1  
growth on oleic acid YNB Oleic Acid   -0.3 -0.0 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5 -0.0 0.0  
growth on ricinoleic acid YNB Glucose   0.2 -0.2 -0.1  
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.2 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.0 -0.2  
auxotrophy Dropout Complete   0.1 -0.2 0.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.0 0.1 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.0 0.0  
growth on ypd YPD   0.3 -0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.1 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   0.7 -0.2 -0.2  
auxotrophy YNB Glucose   0.5 -0.2 0.0  
facs on lipid accumulation Sorted High BODIPY Gate   0.5 0.2 -0.3  
auxotrophy YNB Glucose 75mM Methionine   0.5 -0.1 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.8 -0.2 -0.2  
growth on oleic acid YNB Glucose   0.6 0.0 -0.2  
ypd buoyancy 40 hrs Median Buoyancy   0.6 -0.0 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.4 0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine   0.9 -0.2 -0.1  
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