Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8410: 16778 - K12761 SNF1 carbon catabolite-derepressing protein kinase, at 1155634 to 1159160 16778 mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1159306 to 1160640 16779 mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1160718 to 1162780 16780 mRNA_8413: 16781 - KOG4484 Uncharacterized conserved protein, at 1162825 to 1164107 16781 mRNA_8414: 16782 - Hypothetical Protein, at 1164242 to 1165926 16782
Group Condition mRNA_8410 mRNA_8411 mRNA_8412 mRNA_8413 mRNA_8414
16778
16779
16780
16781
16782
growth on ricinoleic acid YNB Methylricinoleic Acid -2.8 -0.0 0.2 -0.7  
growth on oleic acid YNB Oleic Acid -2.7 0.1 -0.0 -0.7  
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 -0.0 -0.0 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.0 0.0 -1.4  
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 0.4 0.0 -1.0  
facs on lipid accumulation Sorted No BODIPY Gate -1.1 0.2 0.3 -0.3  
growth on oleic acid YNB Glucose -0.2 0.3 0.0 -0.8  
auxotrophy Dropout Complete 0.1 0.2 -0.1 -0.7  
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.2 -0.0 -0.3  
growth on ricinoleic acid YNB Glucose -0.4 0.2 0.3 -0.6  
auxotrophy YNB Glucose 75mM Methionine -0.0 0.1 0.0 -0.5  
growth on ypd YPD 0.4 0.2 0.0 -0.9  
auxotrophy YNB Glucose 0.1 0.1 0.1 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.1 0.3 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.4 0.5 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2 0.3 0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 -0.0 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.3 0.3 0.8  
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.5 0.1 0.7  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 0.1 1.0  
ypd buoyancy 40 hrs High Buoyancy 0.4 0.4 0.1 0.9  
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