Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1099792 to 1101469 16758 mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1101594 to 1103958 16759 mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1104221 to 1108536 16760 mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1108603 to 1114039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1114553 to 1119513 16762
Group Condition mRNA_8390 mRNA_8391 mRNA_8392 mRNA_8393 mRNA_8394
16758
16759
16760
16761
16762
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.7 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 -0.5 0.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.1 -0.1 -0.1 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1 -1.7 -0.2 0.9
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1 -0.7 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.0 -0.2 0.2 -0.6
auxotrophy YNB Glucose 0.3 -0.3 -0.9 0.2 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 0.1 0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.0 0.3 -0.1
growth on ypd YPD -0.1 -0.1 -0.3 0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.7 -0.1 1.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.3 -0.3 0.1 0.5
growth on ricinoleic acid YNB Glucose 0.1 0.0 -0.4 -0.0 0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 0.7 0.0 -0.1
auxotrophy Dropout Complete 0.5 -0.2 -0.6 0.2 0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 0.2 0.2 0.2
growth on oleic acid YNB Glucose -0.1 0.1 0.0 0.2 0.6
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.2 -0.2 0.2 0.7
growth on oleic acid YNB Oleic Acid 0.1 -0.1 0.1 0.3 1.0
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