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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8388: 16756 - Hypothetical Protein, at 1094791 to 1097376
16756
mRNA_8389: 16757 - Hypothetical Protein, at 1098543 to 1099640
16757
mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1099792 to 1101469
16758
mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1101594 to 1103958
16759
mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1104221 to 1108536
16760
Group
Condition
mRNA_8388
mRNA_8389
mRNA_8390
mRNA_8391
mRNA_8392
16756
16757
16758
16759
16760
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
0.1
-0.1
-1.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
-0.2
-0.1
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
-0.0
-0.1
-0.7
auxotrophy
YNB Glucose
0.1
-0.0
0.3
-0.3
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
-0.2
-0.0
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
0.0
0.1
0.0
-0.4
growth on oleic acid
YNB Glucose
-0.2
-0.1
-0.1
0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.4
-0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.4
-0.1
0.0
-0.5
growth on ypd
YPD
0.0
0.3
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
0.5
-0.2
-0.2
auxotrophy
Dropout Complete
0.2
0.1
0.5
-0.2
-0.6
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.1
-0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.2
0.2
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.0
0.2
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.1
-0.0
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
-0.0
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.7
0.0
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.4
-0.1
0.1
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.0
-0.0
-0.2
0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
0.2
0.1
0.1
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