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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8385: 16753 - HMMPfam-Protein of unknown function, DUF608-PF04685,HMMPfam-Bacterial alpha-L-rhamnosidase-PF05592,SUPERFAMILY--SSF48208, at 1085898 to 1088411
16753
mRNA_8386: 16754 - K02868 RP-L11e, RPL11 large subunit ribosomal protein L11e, at 1090246 to 1091683
16754
mRNA_8387: 16755 - Hypothetical Protein, at 1092963 to 1094682
16755
mRNA_8388: 16756 - Hypothetical Protein, at 1094791 to 1097376
16756
mRNA_8389: 16757 - Hypothetical Protein, at 1098543 to 1099640
16757
Group
Condition
mRNA_8385
mRNA_8386
mRNA_8387
mRNA_8388
mRNA_8389
16753
16754
16755
16756
16757
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.0
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.0
0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.2
0.0
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.1
-0.0
-0.1
auxotrophy
YNB Glucose
-0.1
-0.1
0.1
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
-0.1
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.0
0.1
-0.2
auxotrophy
Dropout Complete
-0.2
0.0
0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
0.0
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
-0.0
0.4
growth on ypd
YPD
0.3
-0.1
0.0
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.0
0.4
0.7
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