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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8370: 16738 - K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2, at 1054489 to 1055817
16738
mRNA_8371: 16739 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 1055987 to 1057436
16739
mRNA_8372: 16740 - KOG1729 FYVE finger containing protein, at 1057653 to 1060208
16740
mRNA_8373: 16741 - KOG0504 FOG Ankyrin repeat, at 1060392 to 1061446
16741
mRNA_8374: 16742 - KOG0053 Cystathionine beta-lyases/cystathionine gamma-synthases, at 1061726 to 1063499
16742
Group
Condition
mRNA_8370
mRNA_8371
mRNA_8372
mRNA_8373
mRNA_8374
16738
16739
16740
16741
16742
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-2.0
0.0
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.3
-2.6
0.0
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-3.1
0.1
0.6
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-1.0
-0.9
-0.7
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-1.1
-0.1
0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-1.6
-0.1
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-1.5
0.0
0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
-1.1
0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.8
0.1
0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.7
-0.0
0.2
-0.6
ypd buoyancy
40 hrs Median Buoyancy
0.2
-1.3
0.2
0.5
-0.4
growth on oleic acid
YNB Glucose
0.1
-0.5
-0.0
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.6
-0.1
0.1
-0.4
growth on oleic acid
YNB Oleic Acid
0.3
-0.6
0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.2
0.1
0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.4
-0.1
0.2
-0.5
auxotrophy
YNB Glucose
0.7
0.9
-0.4
0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
-0.4
-0.0
0.1
0.4
auxotrophy
Dropout Complete
0.4
1.2
-0.2
0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
1.0
0.7
-0.2
0.3
-0.3
growth on ypd
YPD
-0.2
2.6
0.0
-0.1
-0.5
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