Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8369: 16737 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011, at 1050307 to 1054065 16737 mRNA_8370: 16738 - K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2, at 1054489 to 1055817 16738 mRNA_8371: 16739 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 1055987 to 1057436 16739 mRNA_8372: 16740 - KOG1729 FYVE finger containing protein, at 1057653 to 1060208 16740 mRNA_8373: 16741 - KOG0504 FOG Ankyrin repeat, at 1060392 to 1061446 16741
Group Condition mRNA_8369 mRNA_8370 mRNA_8371 mRNA_8372 mRNA_8373
16737
16738
16739
16740
16741
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.1 -1.5 0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.5 -1.1 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.7 -2.0 0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.5 -1.0 -0.9 -0.7
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3 -2.6 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.5 -3.1 0.1 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 -1.6 -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.5 -0.0 -1.1 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2 -0.7 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.2 -0.8 0.1 0.3
growth on oleic acid YNB Glucose 0.0 0.1 -0.5 -0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 -1.3 0.2 0.5
growth on oleic acid YNB Oleic Acid -0.1 0.3 -0.6 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.5 -0.6 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.8 -0.4 -0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 0.4 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2 -0.2 0.1 0.2
auxotrophy YNB Glucose -0.4 0.7 0.9 -0.4 0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 1.0 0.7 -0.2 0.3
auxotrophy Dropout Complete -0.2 0.4 1.2 -0.2 0.3
growth on ypd YPD 0.1 -0.2 2.6 0.0 -0.1
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