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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8359: 16727 - Hypothetical Protein, at 1029156 to 1031168
16727
mRNA_8360: 16728 - K02739 PSMB7 20S proteasome subunit beta 2, at 1031213 to 1032623
16728
mRNA_8361: 16729 - K06640 ATR serine/threonine-protein kinase ATR, at 1032908 to 1038730
16729
mRNA_8362: 16730 - Hypothetical Protein, at 1039289 to 1041924
16730
mRNA_8363: 16731 - KOG1693 emp24/gp25L/p24 family of membrane trafficking proteins, at 1042478 to 1043371
16731
Group
Condition
mRNA_8359
mRNA_8360
mRNA_8361
mRNA_8362
mRNA_8363
16727
16728
16729
16730
16731
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.4
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.1
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.6
1.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.0
0.7
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
0.7
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.2
0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.3
0.9
growth on oleic acid
YNB Glucose
-0.2
0.4
0.9
growth on ypd
YPD
-0.2
0.3
1.1
growth on oleic acid
YNB Oleic Acid
-0.0
0.7
0.7
auxotrophy
YNB Glucose
0.1
0.1
1.2
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
1.2
auxotrophy
Dropout Complete
0.1
0.4
1.5
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