Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8354: 16722 - K07734 paiB transcriptional regulator, at 1015400 to 1016161 16722 mRNA_8355: 16723 - KOG2111 Uncharacterized conserved protein, contains WD40 repeats, at 1016689 to 1018583 16723 mRNA_8356: 16724 - K13985 NAPEPLD N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D, at 1018843 to 1020921 16724 mRNA_8357: 16725 - K01739 metB cystathionine gamma-synthase, at 1021277 to 1023018 16725 mRNA_8358: 16726 - HMMPfam-Bin/amphiphysin/Rvs domain for vesicular trafficking-PF10455,HMMPfam-Fungal specific transcription factor domain-PF11951,SMART--SM00721,SUPERFAMILY--SSF103657, at 1023187 to 1029066 16726
Group Condition mRNA_8354 mRNA_8355 mRNA_8356 mRNA_8357 mRNA_8358
16722
16723
16724
16725
16726
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -4.9 0.1 -0.6 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -1.9 -0.1 0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0 0.1 -1.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.5 -0.1 -0.3 0.1
auxotrophy YNB Glucose -0.8 -0.2 -0.1 0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.9 0.3 -0.0 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.0 0.1 -0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.1 0.1 0.6 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.7 -0.0 -0.6 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.9 0.1 -0.8 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.0 0.2 0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1 0.0 0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.6 0.1 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 0.0 0.6 0.0
growth on oleic acid YNB Glucose -0.2 0.4 0.1 -0.1 0.0
auxotrophy Dropout Complete -0.3 0.2 0.1 0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 -0.0 0.5 -0.0
growth on ricinoleic acid YNB Glucose 0.1 0.6 0.0 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.4 0.1 -0.1 0.2
growth on ypd YPD -0.3 0.3 0.4 0.4 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.1 0.0 0.9 -0.1
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