Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8338: 16706 - Hypothetical Protein, at 970678 to 971361 16706 mRNA_8339: 16707 - K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase, at 972438 to 973571 16707 mRNA_8340: 16708 - K03254 EIF3A translation initiation factor 3 subunit A, at 973687 to 977357 16708 mRNA_8341: 16709 - K14569 BMS1 ribosome biogenesis protein BMS1, at 977558 to 981587 16709 mRNA_8342: 16710 - Hypothetical Protein, at 981863 to 982243 16710
Group Condition mRNA_8338 mRNA_8339 mRNA_8340 mRNA_8341 mRNA_8342
16706
16707
16708
16709
16710
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 0.3      
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 0.4      
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.3      
auxotrophy YNB Glucose -0.7 -0.3      
growth on ricinoleic acid YNB Glucose -1.0 0.3      
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.8      
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2      
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2      
growth on oleic acid YNB Glucose -0.3 0.1      
growth on oleic acid YNB Oleic Acid -0.3 0.1      
auxotrophy Dropout Complete -0.1 0.1      
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1      
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0      
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.2      
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.2      
growth on ypd YPD 0.0 0.3      
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.2      
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.6      
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.6      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.6      
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.7      
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