Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966219 to 967737 16704 mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968158 to 970145 16705 mRNA_8338: 16706 - Hypothetical Protein, at 970678 to 971361 16706 mRNA_8339: 16707 - K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase, at 972438 to 973571 16707 mRNA_8340: 16708 - K03254 EIF3A translation initiation factor 3 subunit A, at 973687 to 977357 16708
Group Condition mRNA_8336 mRNA_8337 mRNA_8338 mRNA_8339 mRNA_8340
16704
16705
16706
16707
16708
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.5 -1.9 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.4 -1.5 0.4  
auxotrophy YNB Glucose -0.0 0.0 -0.7 -0.3  
growth on ricinoleic acid YNB Glucose 0.2 -0.2 -1.0 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 -0.7 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.2 0.3 -0.8  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.1 -0.2  
growth on oleic acid YNB Glucose 0.2 -0.1 -0.3 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 0.2 -0.1  
growth on oleic acid YNB Oleic Acid 0.3 -0.1 -0.3 0.1  
auxotrophy Dropout Complete 0.1 0.0 -0.1 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.2 -0.1 -0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 0.4 -0.2  
growth on ypd YPD 0.1 -0.2 0.0 0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 0.1 0.6  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.3 0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.1 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 -0.0 0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.3 0.5 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 0.6 0.7  
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