Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702 mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964932 to 965872 16703 mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966219 to 967737 16704 mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968158 to 970145 16705
Group Condition mRNA_8333 mRNA_8334 mRNA_8335 mRNA_8336 mRNA_8337
16701
16702
16703
16704
16705
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.6 -0.3 -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.1 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 0.1 -0.1 -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 -0.2 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 -0.3 -0.1 -0.1
growth on ypd YPD -0.2 -0.1 -0.1 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3 -0.1 0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.0 0.0 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.6 -0.2 0.2 0.2
growth on oleic acid YNB Glucose -0.2 0.4 0.1 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.1 -0.1 0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.4 0.5 0.1 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 -0.1 0.3 -0.0
auxotrophy YNB Glucose -0.2 0.6 0.2 -0.0 0.0
growth on ricinoleic acid YNB Glucose 0.3 0.6 0.1 0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 1.2 -0.1 0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.6 0.0 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.5 0.0 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 1.1 0.1 0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.8 0.2 0.3 0.2
auxotrophy Dropout Complete 0.1 1.0 0.2 0.1 0.0
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