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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8327: 16695 - K10251 HSD17B12, KAR, IFA38 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase, at 948369 to 949936
16695
mRNA_8328: 16696 - Hypothetical Protein, at 950123 to 950641
16696
mRNA_8329: 16697 - KOG0527 HMG-box transcription factor, at 950835 to 951817
16697
mRNA_8330: 16698 - BLAST clp1-like protein [Schizophyllum commune H4-8], at 951883 to 952795
16698
mRNA_8331: 16699 - K02604 ORC2 origin recognition complex subunit 2, at 955011 to 956688
16699
Group
Condition
mRNA_8327
mRNA_8328
mRNA_8329
mRNA_8330
mRNA_8331
16695
16696
16697
16698
16699
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
0.4
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-1.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-1.2
0.3
growth on ypd
YPD
-0.3
-0.7
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
-0.4
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.7
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.8
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.5
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.9
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.5
0.2
auxotrophy
YNB Glucose
-0.2
0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
0.6
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.4
-0.4
auxotrophy
Dropout Complete
0.1
0.7
-0.3
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