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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8325: 16693 - KOG1688 Golgi proteins involved in ER retention (RER), at 945635 to 946237
16693
mRNA_8326: 16694 - Hypothetical Protein, at 947048 to 947790
16694
mRNA_8327: 16695 - K10251 HSD17B12, KAR, IFA38 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase, at 948369 to 949936
16695
mRNA_8328: 16696 - Hypothetical Protein, at 950123 to 950641
16696
mRNA_8329: 16697 - KOG0527 HMG-box transcription factor, at 950835 to 951817
16697
Group
Condition
mRNA_8325
mRNA_8326
mRNA_8327
mRNA_8328
mRNA_8329
16693
16694
16695
16696
16697
buoyancy on lipid accumulation
40 hrs High Buoyancy
-3.1
0.2
-0.4
-0.5
growth on ypd
YPD
-1.5
-0.4
-0.3
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.1
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
0.4
-0.5
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.5
-1.7
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.3
-0.5
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
0.0
-0.8
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
0.5
-0.2
-0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.5
-0.4
-0.8
growth on oleic acid
YNB Glucose
0.4
-0.2
-0.2
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.1
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
0.5
-0.1
-0.4
-0.4
growth on ricinoleic acid
YNB Glucose
0.1
0.3
-0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.3
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.7
-0.0
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.5
-0.8
0.6
auxotrophy
YNB Glucose
1.2
-0.4
-0.2
0.2
auxotrophy
Dropout Complete
0.7
-0.1
0.1
0.7
ypd buoyancy
40 hrs High Buoyancy
0.9
0.1
0.0
0.4
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