Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8299: 16667 - Hypothetical Protein, at 879552 to 881168 16667 mRNA_8300: 16668 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13640,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SMART-Prolyl 4-hydroxylase alpha subunit homologues.-SM00702, at 881221 to 882082 16668 mRNA_8301: 16669 - K20361 USO1 intracellular protein transport protein USO1, at 882227 to 887090 16669 mRNA_8302: 16670 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 887295 to 889058 16670 mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890417 to 892180 16671
Group Condition mRNA_8299 mRNA_8300 mRNA_8301 mRNA_8302 mRNA_8303
16667
16668
16669
16670
16671
growth on oleic acid YNB Oleic Acid -0.0 0.1   -0.5 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0   -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2   -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2   0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1   -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1   -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2   -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3   -0.6 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.0   -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1   0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3   -0.5 0.2
growth on oleic acid YNB Glucose 0.0 -0.0   0.0 -0.1
auxotrophy YNB Glucose 0.1 0.0   0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1   -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0   0.1 -0.0
auxotrophy Dropout Complete 0.4 -0.0   0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1   0.0 0.1
growth on ypd YPD 0.3 0.2   0.0 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1   0.2 0.2
growth on ricinoleic acid YNB Glucose 0.2 -0.0   0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.0   -0.2 0.6
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