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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8299: 16667 - Hypothetical Protein, at 879552 to 881168
16667
mRNA_8300: 16668 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13640,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SMART-Prolyl 4-hydroxylase alpha subunit homologues.-SM00702, at 881221 to 882082
16668
mRNA_8301: 16669 - K20361 USO1 intracellular protein transport protein USO1, at 882227 to 887090
16669
mRNA_8302: 16670 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 887295 to 889058
16670
mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890417 to 892180
16671
Group
Condition
mRNA_8299
mRNA_8300
mRNA_8301
mRNA_8302
mRNA_8303
16667
16668
16669
16670
16671
growth on oleic acid
YNB Oleic Acid
-0.0
0.1
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.0
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
-0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.2
0.5
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.3
-0.6
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.0
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
-0.5
0.2
growth on oleic acid
YNB Glucose
0.0
-0.0
0.0
-0.1
auxotrophy
YNB Glucose
0.1
0.0
0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.0
0.1
-0.0
auxotrophy
Dropout Complete
0.4
-0.0
0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
0.0
0.1
growth on ypd
YPD
0.3
0.2
0.0
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.0
0.3
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.0
-0.2
0.6
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