Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845921 to 849990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850853 to 852932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853502 to 854309 16656 mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856071 to 857914 16657 mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858193 to 863054 16658
Group Condition mRNA_8286 mRNA_8287 mRNA_8288 mRNA_8289 mRNA_8290
16654
16655
16656
16657
16658
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.3 -0.3 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.1 -0.6 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 0.1 -1.5  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.1 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.1 -0.1 0.5  
growth on oleic acid YNB Glucose 0.1 -0.6 -0.0 0.2  
ypd buoyancy 40 hrs High Buoyancy -0.3 0.2 -0.1 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.6 0.0 -0.0  
growth on ypd YPD -0.1 0.0 0.2 -0.1  
growth on oleic acid YNB Oleic Acid 0.6 -0.5 0.5 -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.5 -0.1 1.2  
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.4 -0.0 0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.3 0.1 -0.2  
auxotrophy YNB Glucose 0.3 -0.4 0.2 0.2  
growth on ricinoleic acid YNB Glucose 0.4 -0.3 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.7 -0.1 1.5  
auxotrophy Dropout Complete 0.0 -0.2 0.3 0.2  
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.3 0.4 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 -0.0 0.7  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.5 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.8 0.2 1.6  
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