Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_8285: 16653 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 841143 to 845451 16653 mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845921 to 849990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850853 to 852932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853502 to 854309 16656 mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856071 to 857914 16657
Group Condition mRNA_8285 mRNA_8286 mRNA_8287 mRNA_8288 mRNA_8289
16653
16654
16655
16656
16657
facs on lipid accumulation Sorted High BODIPY Gate   -0.9 -0.3 -0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.4 -0.1 -0.6 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 -0.1 0.1 -1.5
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.1 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -1.1 0.1 -0.1 0.5
growth on oleic acid YNB Glucose   0.1 -0.6 -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy   -0.3 0.2 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.3 -0.6 0.0 -0.0
growth on ypd YPD   -0.1 0.0 0.2 -0.1
growth on oleic acid YNB Oleic Acid   0.6 -0.5 0.5 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.5 -0.5 -0.1 1.2
ypd buoyancy 40 hrs Median Buoyancy   -0.4 0.4 -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy   0.1 0.3 0.1 -0.2
auxotrophy YNB Glucose   0.3 -0.4 0.2 0.2
growth on ricinoleic acid YNB Glucose   0.4 -0.3 0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 -0.7 -0.1 1.5
auxotrophy Dropout Complete   0.0 -0.2 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine   0.3 -0.3 0.4 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 -0.2 -0.0 0.7
auxotrophy YNB Glucose 75mM Arginine   0.2 -0.1 0.5 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 -0.8 0.2 1.6
remove
mRNA_8285
plot
remove
mRNA_8286
plot
remove
mRNA_8287
remove
mRNA_8288
plot
remove
mRNA_8289
plot