Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8283: 16651 - HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716, at 837568 to 839019 16651 mRNA_8284: 16652 - K07023 K07023 putative hydrolases of HD superfamily, at 839428 to 840649 16652 mRNA_8285: 16653 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 841143 to 845451 16653 mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845921 to 849990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850853 to 852932 16655
Group Condition mRNA_8283 mRNA_8284 mRNA_8285 mRNA_8286 mRNA_8287
16651
16652
16653
16654
16655
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.8   -0.9 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.2   -0.5 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.4   -1.1 0.1
growth on ypd YPD -0.4 -0.4   -0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6   -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.7   0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.1   -0.4 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.4   -0.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3   -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1   -0.4 0.4
ypd buoyancy 40 hrs High Buoyancy -0.5 0.3   -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 0.5   0.3 -0.3
auxotrophy YNB Glucose -0.0 0.4   0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 0.5   0.2 -0.1
growth on oleic acid YNB Glucose 0.3 0.8   0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.6   0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.0   0.3 -0.2
auxotrophy Dropout Complete 0.3 0.4   0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.8   0.3 -0.6
growth on oleic acid YNB Oleic Acid 0.3 0.3   0.6 -0.5
growth on ricinoleic acid YNB Glucose 0.2 0.5   0.4 -0.3
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