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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8280: 16648 - KOG2157 Predicted tubulin-tyrosine ligase, at 830220 to 831668
16648
mRNA_8281: 16649 - Hypothetical Protein, at 832236 to 832909
16649
mRNA_8282: 16650 - K11359 SPT7 transcriptional activator SPT7, at 833036 to 836352
16650
mRNA_8283: 16651 - HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716, at 837568 to 839019
16651
mRNA_8284: 16652 - K07023 K07023 putative hydrolases of HD superfamily, at 839428 to 840649
16652
Group
Condition
mRNA_8280
mRNA_8281
mRNA_8282
mRNA_8283
mRNA_8284
16648
16649
16650
16651
16652
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.5
0.1
-0.3
growth on ypd
YPD
0.3
-0.6
-0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.7
-0.5
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.6
-0.7
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.4
-0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.3
0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
-1.7
0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.8
0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.4
-0.3
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.8
0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
0.7
-0.2
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.3
-1.2
0.6
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
0.1
0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.4
-0.1
0.5
growth on oleic acid
YNB Glucose
-0.3
-0.0
0.3
0.8
growth on ricinoleic acid
YNB Glucose
-0.3
0.5
0.2
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.2
0.5
0.0
auxotrophy
Dropout Complete
-0.2
0.3
0.3
0.4
auxotrophy
YNB Glucose
-0.1
1.0
-0.0
0.4
growth on oleic acid
YNB Oleic Acid
-0.3
1.2
0.3
0.3
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