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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8270: 16638 - Hypothetical Protein, at 812469 to 813656
16638
mRNA_8271: 16639 - K14397 NUDT21, CPSF5, CFIM25 cleavage and polyadenylation specificity factor subunit 5, at 814047 to 815109
16639
mRNA_8272: 16640 - K07750 E1.14.13.72, SC4MOL, ERG25 methylsterol monooxygenase, at 815448 to 817149
16640
mRNA_8273: 16641 - K01866 YARS, tyrS tyrosyl-tRNA synthetase, at 817492 to 819082
16641
mRNA_8274: 16642 - KOG4080 Mitochondrial ribosomal protein L32, at 819510 to 820015
16642
Group
Condition
mRNA_8270
mRNA_8271
mRNA_8272
mRNA_8273
mRNA_8274
16638
16639
16640
16641
16642
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.3
auxotrophy
YNB Glucose
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
auxotrophy
Dropout Complete
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.5
growth on oleic acid
YNB Glucose
0.2
-0.2
growth on oleic acid
YNB Oleic Acid
0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.0
growth on ricinoleic acid
YNB Glucose
0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.2
growth on ypd
YPD
0.7
0.1
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