Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8262: 16630 - K01958 PC, pyc pyruvate carboxylase, at 792361 to 796882 16630 mRNA_8263: 16631 - KOG1432 Predicted DNA repair exonuclease SIA1, at 797648 to 800551 16631 mRNA_8264: 16632 - KOG4754 Predicted phosphoglycerate mutase, at 800850 to 802295 16632 mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802560 to 804214 16633 mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634
Group Condition mRNA_8262 mRNA_8263 mRNA_8264 mRNA_8265 mRNA_8266
16630
16631
16632
16633
16634
buoyancy on lipid accumulation 40 hrs Low Buoyancy -3.6 -0.5 0.2 -0.1 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -3.0 -0.1 0.3 -0.3 -1.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -3.8 -0.2 -0.2 -0.1 -0.4
auxotrophy YNB Glucose -3.2 0.2 -0.0 -0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine -3.5 0.2 0.2 -0.1 -0.9
facs on lipid accumulation Sorted High BODIPY Gate -3.2 0.1 -0.3 0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 -0.2 0.4 0.1 -1.8
growth on oleic acid YNB Glucose -3.2 -0.1 0.0 0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -2.9 0.6 0.1 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -2.4 0.1 -0.2 0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine -2.5 0.2 0.3 0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.9 -0.2 0.1 -0.0 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.2 -0.2 0.1 -0.9
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2 0.2 -0.0 -1.3
growth on oleic acid YNB Oleic Acid -0.1 0.3 0.1 -0.2 -1.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 -0.2 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.3 -0.3 0.2 -1.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 0.0 0.1 -0.5
growth on ypd YPD -0.4 0.5 -0.5 -0.3 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.0 0.2 0.1 -0.7
auxotrophy Dropout Complete -0.1 0.6 0.8 0.1 -0.3
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