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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774552 to 775844
16621
mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333
16622
mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914
16623
mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779592 to 781358
16624
mRNA_8257: 16625 - Hypothetical Protein, at 781608 to 783026
16625
Group
Condition
mRNA_8253
mRNA_8254
mRNA_8255
mRNA_8256
mRNA_8257
16621
16622
16623
16624
16625
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.1
-0.4
-0.2
growth on ypd
YPD
0.4
0.2
-1.3
-0.3
auxotrophy
YNB Glucose
-0.7
-0.1
-0.5
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
0.1
0.8
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.0
0.5
-0.2
auxotrophy
Dropout Complete
-0.2
0.1
-0.3
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.1
-0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.0
0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.1
-0.7
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.1
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
-0.4
0.4
growth on ricinoleic acid
YNB Glucose
-0.6
0.3
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.1
-0.7
0.3
growth on oleic acid
YNB Glucose
0.4
-0.0
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.0
-0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
0.2
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.0
0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.0
0.3
-0.0
growth on oleic acid
YNB Oleic Acid
0.5
0.1
0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
0.7
-0.2
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