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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760832 to 762310
16616
mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762768 to 764331
16617
mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764459 to 766227
16618
mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766880 to 770400
16619
mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770970 to 773846
16620
Group
Condition
mRNA_8248
mRNA_8249
mRNA_8250
mRNA_8251
mRNA_8252
16616
16617
16618
16619
16620
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.6
-0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.1
-0.3
0.3
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
0.0
0.4
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.7
-0.4
-0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
-0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.3
0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.1
0.4
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
0.4
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.4
0.2
0.1
growth on ypd
YPD
0.0
-0.3
0.1
0.3
growth on oleic acid
YNB Glucose
-0.2
0.0
0.2
0.1
auxotrophy
Dropout Complete
0.0
-0.2
0.2
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
0.0
-0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
0.4
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.0
-0.2
0.3
auxotrophy
YNB Glucose
0.2
-0.0
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.4
-0.0
0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.8
0.0
-0.2
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.1
0.0
-0.3
0.3
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