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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8244: 16612 - K14786 KRI1 protein KRI1, at 751805 to 754209
16612
mRNA_8245: 16613 - HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506, at 754503 to 755818
16613
mRNA_8246: 16614 - Hypothetical Protein, at 756174 to 757457
16614
mRNA_8247: 16615 - K01426 E3.5.1.4, amiE amidase, at 757783 to 759749
16615
mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760832 to 762310
16616
Group
Condition
mRNA_8244
mRNA_8245
mRNA_8246
mRNA_8247
mRNA_8248
16612
16613
16614
16615
16616
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
-3.1
0.1
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.8
-0.5
-2.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.4
-0.4
-1.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.7
-1.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.5
-0.2
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-1.1
0.5
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
0.1
-0.5
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.5
-0.6
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-1.0
0.1
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
0.3
-0.6
growth on ypd
YPD
0.1
-0.5
0.2
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.7
0.3
0.3
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.2
0.0
0.3
growth on oleic acid
YNB Glucose
0.2
0.2
0.0
-0.2
auxotrophy
Dropout Complete
0.5
0.9
-0.8
0.0
growth on oleic acid
YNB Oleic Acid
-0.1
0.8
0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.6
-0.1
1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
1.1
0.5
0.6
auxotrophy
YNB Glucose
0.0
1.7
-0.4
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.9
1.0
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.8
1.7
0.4
-0.2
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