Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716200 to 719512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720080 to 721710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722627 to 724673 16598 mRNA_8231: 16599 - KOG0927 Predicted transporter (ABC superfamily), at 725179 to 727142 16599 mRNA_8232: 16600 - K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4, at 727305 to 728231 16600
Group Condition mRNA_8228 mRNA_8229 mRNA_8230 mRNA_8231 mRNA_8232
16596
16597
16598
16599
16600
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 -1.2 -0.0 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1 -0.4 0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.7 0.5 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.2 0.1 -0.4 -0.0 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 0.0 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 -0.3 0.0 -0.3
auxotrophy YNB Glucose -0.3 -0.2 0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 0.4 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 0.4 0.3 0.3
auxotrophy Dropout Complete -0.3 -0.1 0.9 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.0 0.2 -0.4 0.0
growth on ypd YPD -0.2 -0.0 0.1 0.2 0.7
growth on ricinoleic acid YNB Glucose 0.1 -0.1 1.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.1 -0.1 -0.1 0.1
growth on oleic acid YNB Glucose -0.4 -0.1 0.7 0.1 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 1.3 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.4 2.1 -0.1 0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 0.1 3.0 -0.4 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1 -0.1 1.4 0.0 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 -0.2 3.1 -0.0 1.0
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