Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8226: 16594 - KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains, at 713959 to 715025 16594 mRNA_8227: 16595 - BLAST Post-SET domain protein [Cordyceps confragosa RCEF 1005], at 715339 to 716197 16595 mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716200 to 719512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720080 to 721710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722627 to 724673 16598
Group Condition mRNA_8226 mRNA_8227 mRNA_8228 mRNA_8229 mRNA_8230
16594
16595
16596
16597
16598
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 0.0 -0.1 -0.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.2 0.1 -0.2 -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.1 -1.2 0.1 -0.4
auxotrophy YNB Glucose -0.6 -0.3 -0.3 -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.2 -0.5 -0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0 -0.5 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 -0.4 -0.2 0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.0 -0.0 0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.1 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.0 -0.7 -0.1 0.0
growth on ypd YPD -0.1 0.0 -0.2 -0.0 0.1
auxotrophy Dropout Complete -0.5 -0.2 -0.3 -0.1 0.9
growth on oleic acid YNB Glucose -0.1 0.0 -0.4 -0.1 0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1 0.7 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.1 0.7 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 0.1 -0.1 1.3
growth on ricinoleic acid YNB Glucose 0.6 -0.1 0.1 -0.1 1.1
growth on oleic acid YNB Oleic Acid 0.7 0.0 -0.3 -0.4 2.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.2 1.1 -0.1 1.4
growth on ricinoleic acid YNB Ricinoleic Acid 1.0 -0.1 -0.8 0.1 3.0
growth on ricinoleic acid YNB Methylricinoleic Acid 1.5 -0.2 0.7 -0.2 3.1
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