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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8222: 16590 - KOG3140 Predicted membrane protein, at 704261 to 706813
16590
mRNA_8223: 16591 - K00801 FDFT1 farnesyl-diphosphate farnesyltransferase, at 707140 to 708844
16591
mRNA_8224: 16592 - K00948 PRPS, prsA ribose-phosphate pyrophosphokinase, at 709564 to 711429
16592
mRNA_8225: 16593 - HMMPfam-DSBA-like thioredoxin domain-PF01323,SUPERFAMILY--SSF52833, at 711695 to 712857
16593
mRNA_8226: 16594 - KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains, at 713959 to 715025
16594
Group
Condition
mRNA_8222
mRNA_8223
mRNA_8224
mRNA_8225
mRNA_8226
16590
16591
16592
16593
16594
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.8
-2.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.5
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.7
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.5
0.1
auxotrophy
YNB Glucose
0.1
0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.3
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.2
-0.4
auxotrophy
Dropout Complete
0.2
0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
-0.0
growth on ypd
YPD
-0.1
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
0.4
growth on oleic acid
YNB Glucose
0.3
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.5
-0.0
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.7
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.5
1.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.9
1.0
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