Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697887 to 698253 16586 mRNA_8219: 16587 - K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1), at 698551 to 700808 16587 mRNA_8220: 16588 - KOG3894 SNARE protein Syntaxin 18/UFE1, at 701037 to 702340 16588 mRNA_8221: 16589 - KOG3140 Predicted membrane protein, at 702441 to 703886 16589 mRNA_8222: 16590 - KOG3140 Predicted membrane protein, at 704261 to 706813 16590
Group Condition mRNA_8218 mRNA_8219 mRNA_8220 mRNA_8221 mRNA_8222
16586
16587
16588
16589
16590
ypd buoyancy 40 hrs Low Buoyancy   -0.4   -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine   -0.3   -0.7 0.0
auxotrophy YNB Glucose   -0.0   -0.9 0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2   -1.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate   -0.4   -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.1   -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4   -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.7   -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy   -0.1   0.1 -0.3
growth on oleic acid YNB Oleic Acid   0.3   -0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.5   0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.1   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.7   0.5 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.7   0.6 0.0
growth on ricinoleic acid YNB Glucose   0.3   -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1   0.2 0.2
growth on oleic acid YNB Glucose   0.6   -0.6 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.4   -0.1 0.0
auxotrophy Dropout Complete   0.4   -0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid   0.4   0.3 0.2
growth on ypd YPD   1.8   0.5 -0.1
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