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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686292 to 689011
16584
mRNA_8217: 16585 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 689708 to 696121
16585
mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697887 to 698253
16586
mRNA_8219: 16587 - K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1), at 698551 to 700808
16587
mRNA_8220: 16588 - KOG3894 SNARE protein Syntaxin 18/UFE1, at 701037 to 702340
16588
Group
Condition
mRNA_8216
mRNA_8217
mRNA_8218
mRNA_8219
mRNA_8220
16584
16585
16586
16587
16588
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.0
0.0
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.0
0.0
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.6
0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.6
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.2
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.2
-0.4
auxotrophy
YNB Glucose
0.0
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.6
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
0.3
auxotrophy
Dropout Complete
0.1
-0.1
0.4
growth on oleic acid
YNB Glucose
0.5
-0.1
0.6
auxotrophy
YNB Glucose 75mM Methionine
1.2
-0.0
-0.2
growth on ypd
YPD
-0.8
0.2
1.8
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