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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168
16582
mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684650 to 685960
16583
mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686292 to 689011
16584
mRNA_8217: 16585 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 689708 to 696121
16585
mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697887 to 698253
16586
Group
Condition
mRNA_8214
mRNA_8215
mRNA_8216
mRNA_8217
mRNA_8218
16582
16583
16584
16585
16586
ypd buoyancy
40 hrs No Buoyancy Separation
-3.9
-1.5
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.1
-1.7
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.5
-0.2
-1.0
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
0.3
-1.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-1.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
-1.6
0.1
auxotrophy
Dropout Complete
-0.5
-0.5
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.4
-0.7
0.0
auxotrophy
YNB Glucose
-0.5
-0.2
0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
-0.0
-0.9
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.5
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.6
-0.6
-0.1
growth on ypd
YPD
0.5
-0.0
-0.8
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.4
0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-0.6
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.4
0.6
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
0.5
-0.1
growth on oleic acid
YNB Oleic Acid
0.6
-0.2
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.7
0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.1
0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.4
1.2
-0.0
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