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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8211: 16579 - K02894 RP-L23e, RPL23 large subunit ribosomal protein L23e, at 679410 to 680572
16579
mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680778 to 681996
16580
mRNA_8213: 16581 - KOG1590 Uncharacterized conserved protein, at 682134 to 683094
16581
mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168
16582
mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684650 to 685960
16583
Group
Condition
mRNA_8211
mRNA_8212
mRNA_8213
mRNA_8214
mRNA_8215
16579
16580
16581
16582
16583
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
1.5
-3.9
-1.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-2.2
-0.6
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.5
-1.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-1.9
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-1.4
-0.8
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-2.5
0.7
-0.0
growth on oleic acid
YNB Glucose
-0.5
-0.5
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-1.9
0.1
0.3
auxotrophy
Dropout Complete
-0.3
0.3
-0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.9
-0.2
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.6
0.1
-0.4
auxotrophy
YNB Glucose
-0.2
0.7
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-1.3
1.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.8
0.7
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
1.5
-1.2
-0.1
growth on ypd
YPD
-0.7
0.5
0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.3
-0.1
0.4
growth on oleic acid
YNB Oleic Acid
-0.2
0.3
0.6
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.5
0.0
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.5
-0.1
0.6
ypd buoyancy
40 hrs High Buoyancy
0.3
1.2
-0.2
-0.5
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